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accession-icon SRP067181
Transcriptome sequencing of porcine liver samples
  • organism-icon Sus scrofa
  • sample-icon 26 Downloadable Samples
  • Technology Badge IconIllumina HiSeq 2000

Description

Identification of genes and causal mutations regulating growth and fatness traits in pig. Overall design: Transcriptome sequencing of 10 liver samples of two groups of divergent pigs for growth and fatness.

Publication Title

Using RNA-Seq SNP data to reveal potential causal mutations related to pig production traits and RNA editing.

Sample Metadata Fields

Sex, Age, Specimen part, Subject

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accession-icon GSE47941
Adipose tissue nutrigenomic study in Iberian pigs with dietary intervention of oleic acid supplementation
  • organism-icon Sus scrofa
  • sample-icon 15 Downloadable Samples
  • Technology Badge Icon Affymetrix Porcine Genome Array (porcine)

Description

We studied the influence of the oleic acid content of the diet on adipose tissue transcriptome.

Publication Title

Dietary energy source largely affects tissue fatty acid composition but has minor influence on gene transcription in Iberian pigs.

Sample Metadata Fields

Sex, Specimen part, Treatment

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refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

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Developed by the Childhood Cancer Data Lab

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Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

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